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Accessing and analysing high-throughput genomic data from public repositories
Category: Laboratory Studies
Location: Webinar | Date: 25 February 2022
We are pleased to let you know of a webinar to be held at 9.30am on the 25th February 2022 on the topic, Accessing and analysing high-throughput genomic data from public repositories. We have three talks planned
9.30 –10.10 FAIR principles and promoting openness in life sciences (Mallory Freeberg, European Bioinformatics Institute)
- FAIR data and metadata standards
- Resources for sharing life science data
- Best practices for submitting FAIR data
- Next-level FAIR: sharing code, software, workflows
- Case study: Sharing sensitive human genomics data at the European Genome-phenome Archive
10.10–10.50 Utilising publicly available multi-omics data for discovery and validation analyses: tips and case studies (Kevin Litchfield, University College London)
- What datasets are out there
- How to get them
- How to analyse them: illustration with individual patient data cancer meta-analysis
10.50– 11:00- break
11.00–11.30: Dealing with clinical meta-data (Jérémie Nsengimana, Newcastle University)
- What is clinical metadata
- Why clinical metadata is a rare commodity
- Why good metadata is even rarer
- Use and misuse of publicly accessible metadata: illustration with TCGA dataset
11.30–12:00 breakout rooms
12:00. EndWhat is clinical metadataWhy clinical metadata is a rare commodityWhy good metadata is even rarerFAIR data and metadata standards